Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907235.1_cds_XP_016457372.1_51104
CDS Infomation

[gene=LOC107781216] [db_xref=GeneID:107781216] [protein=importin subunit alpha-2-like] [protein_id=XP_016457372.1] [location=join(3508..3717,4297..4393,4497..4588,4686..4817,4988..5173,5966..6129,6251..6329,7065..7193,7501..7628,7719..8088)] [gbkey=CDS]
Sequence

ATGTCGCTGAGACCGAGTGCGAGGACGGAGGTTCGTCGGAACCGGTATAAGGTAGCCGTG
GATGCGGAGGAAGGAAGGCGTAGGAGAGAGGATAACATGGTTGAGATTCGTAAGAATAGG
AGAGAGGAAAGCTTACAGAAGAAGCGACGTGAAGGTCTTCAACCGGATCAGCTACATAAT
GTTCCCGTTCAGACAACCTCTGGCGAAAAGTTAGAGATGATACCACAATTGGTTGCAGGT
GTTTGGGGCGAAGATGGCAATGTACAGCTTGAGGCTACTTCTTATTTCAGAAAAATGCTC
TCAATCGAAAGGAGTCCCCCAATAACGGAAGTAATTCAAGCTGGTGTAGTTCCTCGTTTT
GTTCAATTTCTTATGAGAGATGACTTTCCACAGCTTCAGTTTGAGGCAGCTTGGGCTCTC
ACAAATATTGCATCTGGAACATCTGAGCATACAAAGGTGGTAATTGATTCTGGTGCAGTC
CCAAGTTTTGTGAAACTTCTTGGTTCTCCTAGCGATGATGTCCGAGAGCAGGCTGTGTGG
GCTCTAGGAAATGTTGCTGGTGATTCACCAAAATGCCGTGATCTAGTCCTTAGCTGTGGT
GCTTTGGCTCCCTTGTTGGCCCAATTTAACCCAAATGCCAAGCTATCTATGCTGAGAAAT
GCCACTTGGACACTTTCAAATTTCTGTAGAGGGAAGCCACAACCTTCTTTTGATCAGACA
AGGCCTGCTCTTCCAGCTCTTCAACAGCTAATACATTCGACCGATGAAGAAGTTTTAACT
GATGCATGCTGGGCACTCTCATATCTTTCCGATGGTACAAATGATAAAATTCAAGCTGTT
ATTGATTCTGGAGTATGTCCCCGACTGGTTGAGTTGTTAGGTCATCCTTCTCCGTCGGTG
CTGATTCCTGCTCTAAGGACAGTTGGAAATATTGTCACCGGAGATGATATGCAAACTCAG
TGTATCATCAATCATCAGGCTTTGCCCTGTCTCTTGGTCTTGTTGAATGGTAATCACAAG
AAAAGTATAAAGAAGGAAGCTTGTTGGACAATTTCAAACATTACAGCTGGCAACAAGGAG
CAAATTCAGTGTGTAATTGAGGCTGGTGTTTTTGGTCCTCTTGTTAATTTGCTTCAAAAT
GCGGAGTTTGATATTAAAAAAGAGGCTGCATGGGCAATCTCCAATGCCACATCTGGTGGT
ACTAATGAACAGATCAAATACCTTGTAAGTCAAGGTTGTATCAAACCACTCTGTGATCTC
CTAGTTTGTCCTGACCCGAGGATTGTCACAGTTTGTCTTGAAGGGCTTGAAAATATTTTG
AAGGTTGGCGATGTTGAGAATTTGGGTGAGGCAGGAAATATAAACGTGTATGCTCAAATG
ATTGATGATGCAGAAGGTATAGAAAAAATAGAGAATCTTCAAAGTCATGACAATCAAGAG
ATTTATGAAAAGGCTGTGAAGATTCTTGAGACGTACTGGTTGGAAGAAGATGATGAGACC
ATGCCACCTGGTGATGCGCCCCAACAGGGTTTCCAGTTTGGAGGCGGGAATGTCTCTGTA
CCATCAGGTGGATTCAACTTCAACTGA

Peptide Sequence

PEP ID

XP_016457372.1
PEP Infomation

PREDICTED: importin subunit alpha-2-like [Nicotiana tabacum]
Sequence

MSLRPSARTEVRRNRYKVAVDAEEGRRRREDNMVEIRKNRREESLQKKRREGLQPDQLHN
VPVQTTSGEKLEMIPQLVAGVWGEDGNVQLEATSYFRKMLSIERSPPITEVIQAGVVPRF
VQFLMRDDFPQLQFEAAWALTNIASGTSEHTKVVIDSGAVPSFVKLLGSPSDDVREQAVW
ALGNVAGDSPKCRDLVLSCGALAPLLAQFNPNAKLSMLRNATWTLSNFCRGKPQPSFDQT
RPALPALQQLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIDSGVCPRLVELLGHPSPSV
LIPALRTVGNIVTGDDMQTQCIINHQALPCLLVLLNGNHKKSIKKEACWTISNITAGNKE
QIQCVIEAGVFGPLVNLLQNAEFDIKKEAAWAISNATSGGTNEQIKYLVSQGCIKPLCDL
LVCPDPRIVTVCLEGLENILKVGDVENLGEAGNINVYAQMIDDAEGIEKIENLQSHDNQE
IYEKAVKILETYWLEEDDETMPPGDAPQQGFQFGGGNVSVPSGGFNFN

Transcript Sequence

Gene sequence data has not been registered.